The detailed information of tRNA gene sequence


Sequence ID>ENV08001388
Genome IDABMX01004531
Search identical group
Phylum/Classfish metagenome; microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease
Species
Start position on genome 30
End posion on genome 106
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcttcaga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
aatgcannnn
Secondary structure (Cloverleaf model)
>ENV08001388	Met	CAT
                   a      ACCA aatgcannnn
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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