The detailed information of tRNA gene sequence


Sequence ID>WENV183769833
Genome IDPPYE01432374
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 206413
End posion on genome 206325
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaacatatag
tRNA gene sequence 
GGAGCGGTATCGAAGTGGTCATAACGGGCCTGACTCGAAATCAGGTAGTCCTCACGGGCT
CGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
tcgaaaaatc
Secondary structure (Cloverleaf model)
>WENV183769833	Ser	CGA
                   g      GCCA tcgaaaaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | +                 T T
  C         A C G G
    A T A          G     TAGTCCTCACGGGCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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