The detailed information of tRNA gene sequence


Sequence ID>WENV183770315
Genome IDPPYE01433300
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 6360
End posion on genome 6284
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agacgtttat
tRNA gene sequence 
GGCGGCATAGCTCAGTTGGCTAGAGCATTCGGTTCATACCCGAAGTGTCACTGGTTCAAA
TCCAGTTGCCGCTACCA
Downstream region at tRNA end position 
aatggcccgg
Secondary structure (Cloverleaf model)
>WENV183770315	Met	CAT
                   t      ACCA aatggcccgg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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