The detailed information of tRNA gene sequence


Sequence ID>ENV08001393
Genome IDABMX01017196
Search identical group
Phylum/Classfish metagenome; microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease
Species
Start position on genome 12
End posion on genome 103
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcttttcat
tRNA gene sequence 
GGAGAGGTGTCCGAGCTGGCCGAAGGAGCACGATTGGAAATCGTGTAGGCGTCACAAGCG
TCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001393	Ser	GGA
                   t      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  C         A G G A
    C G A          G     TAGGCGTCACAAGCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK