The detailed information of tRNA gene sequence


Sequence ID>WENV183770423
Genome IDPPYE01434173
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 7798
End posion on genome 7874
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttagctattc
tRNA gene sequence 
GGCGGCATAGCTCAGTTGGCTAGAGCATGCGGTTCATACCCGCAGTGTCCCCGGTTCAAA
TCCAGGTGCCGCTACCA
Downstream region at tRNA end position 
gagaatccca
Secondary structure (Cloverleaf model)
>WENV183770423	Met	CAT
                   c      ACCA gagaatccca
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G A C C     A
      T G A        A      | |   | |     A
    T       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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