The detailed information of tRNA gene sequence


Sequence ID>ENV08001396
Genome IDABMY01000188
Search identical group
Phylum/Classfish metagenome; microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling
Species
Start position on genome 87
End posion on genome 12
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgaccgtttt
tRNA gene sequence 
GTCCCCTTCGTCTAGAGGCCTAGGACATCACCCTTTCACGGTGAGTACGGGGGTTCGAAT
CCCCCAGGGGACGCCA
Downstream region at tRNA end position 
aataaaaaag
Secondary structure (Cloverleaf model)
>ENV08001396	Glu	TTC
                   t      GCCA aataaaaaag
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GTAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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