The detailed information of tRNA gene sequence


Sequence ID>WENV183770822
Genome IDPPYE01448511
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 400
End posion on genome 313
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attcatgcaT
tRNA gene sequence 
GGAGAGGTATCGAAGCGGTCATAACGAGGCGGTCTTGAAAACCGTTTGTCCGAAAGGGCG
CGTGGGTTCGAATCCCACCCTCTCCGTta
Downstream region at tRNA end position 
tctgaaaatc
Secondary structure (Cloverleaf model)
>WENV183770822	Ser	TGA
                   T      GTta tctgaaaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  C         A C G A
    A T A          G     TTGTCCGAAAGGGCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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