The detailed information of tRNA gene sequence


Sequence ID>WENV183770929
Genome IDPPYE01453265
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 43904
End posion on genome 43995
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgatctat
tRNA gene sequence 
GGAGAGTTGTCCGAGCTGGTCGAAGGAGCACGATTGGAAATCGTGTAACCGCCTAAAACG
GTTCGAGGGTTCGAATCCCTTGCTCTCCGCCA
Downstream region at tRNA end position 
tgattgtgcg
Secondary structure (Cloverleaf model)
>WENV183770929	Ser	GGA
                   t      GCCA tgattgtgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G          T A
                    T     T T C C C     A
    T C G A        G      + | | | |     G
  G         G C C T       G A G G G     C
  G           | | |                 T T
  T         A G G A
    C G A          G     TAACCGCCTAAAACGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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