The detailed information of tRNA gene sequence


Sequence ID>ENV08001401
Genome IDABMY01007441
Search identical group
Phylum/Classfish metagenome; microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling
Species
Start position on genome 88
End posion on genome 12
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atacctttat
tRNA gene sequence 
AGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAG
TCCACTCAGGCCTACCA
Downstream region at tRNA end position 
cttcttcgaa
Secondary structure (Cloverleaf model)
>ENV08001401	Ile	GAT
                   t      ACCA cttcttcgaa
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     T C A C C     A
      G G A        A      + | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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