The detailed information of tRNA gene sequence


Sequence ID>WENV183771168
Genome IDPPYE01453867
Search identical group
Phylum/Class[PPYE] human gut metagenome; stool from patient with ulcerative colitis
Species
Start position on genome 25159
End posion on genome 25087
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gcaaacagcc
tRNA gene sequence 
GGTGGATTCGTCTAACGGTTAGGACACATGCCTCTCACGCATGTAATACGAGTTCGATTC
TCGTATCCACTACgg
Downstream region at tRNA end position 
taaaaaaagc
Secondary structure (Cloverleaf model)
>WENV183771168	Glu	CTC
                   c      ACgg taaaaaaagc
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     T - A          T T
                    T     T G C T C     A
      C A A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     TAAT
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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