The detailed information of tRNA gene sequence


Sequence ID>WENV183771925
Genome IDPPYF01001219
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 7520
End posion on genome 7430
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taggcccatt
tRNA gene sequence 
GGAGATTTACTCAAGTGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGTTTATACC
GGCGCGAGGGTTCGAATCTCTCAATCTCCGCtt
Downstream region at tRNA end position 
taaagtaaac
Secondary structure (Cloverleaf model)
>WENV183771925	Ser	GCT
                   t      GCtt taaagtaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     T - A          T A
                    T     C T C T C     A
      T G A        A      | | | + |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGTTTATACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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