The detailed information of tRNA gene sequence


Sequence ID>WENV183772312
Genome IDPPYF01016725
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 42012
End posion on genome 42106
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatcctatat
tRNA gene sequence 
GGAAGATCATCGTCCCCGGTGGGGCGGCTGGACTTCAAATCCAGATGGGGCCGCCAGCGG
TCCTTGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
ctcatagttt
Secondary structure (Cloverleaf model)
>WENV183772312	SeC	TCA
                   t      GCCA ctcatagttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    A     T G T C C     A
      C C C        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     ATGGGGCCGCCAGCGGTCCTTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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