The detailed information of tRNA gene sequence


Sequence ID>ENV08001420
Genome IDABMZ01006632
Search identical group
Phylum/Classfish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease
Species
Start position on genome 34
End posion on genome 109
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gcggtctttc
tRNA gene sequence 
GGGTCGTTAGCTCAGCTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCAGGTTCGAAT
CCCGCACGGCCTACCA
Downstream region at tRNA end position 
cgaannnnnn
Secondary structure (Cloverleaf model)
>ENV08001420	Lys	TTT
                   c      ACCA cgaannnnnn
                     G + T
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     T - A          T A
                    T     C G C C C     A
      C G A        A      | |   | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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