The detailed information of tRNA gene sequence


Sequence ID>ENV08001424
Genome IDABMZ01008614
Search identical group
Phylum/Classfish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease
Species
Start position on genome 89
End posion on genome 16
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
acgcggtctc
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCAGAAGCTTCCCAAGCTTAAGACGAGGGTTCGATCCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
gatcgcttcc
Secondary structure (Cloverleaf model)
>ENV08001424	Gly	CCC
                   c      TCCA gatcgcttcc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGAC
                    G   A
                    A - T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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