The detailed information of tRNA gene sequence


Sequence ID>ENV08001434
Genome IDABMZ01019329
Search identical group
Phylum/Classfish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease
Species
Start position on genome 20
End posion on genome 96
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccacgccgaa
tRNA gene sequence 
CTGCCCTTAGCTCAACTGGATAGAGCAATGGCCTTCTAAGCCATAGGTCGGGGGTTCGAG
TCCCTCAGGGCAGGCCA
Downstream region at tRNA end position 
gtttcacttn
Secondary structure (Cloverleaf model)
>ENV08001434	Arg	TCT
                   a      GCCA gtttcacttn
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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