The detailed information of tRNA gene sequence


Sequence ID>ENV08001439
Genome IDABNA01007238
Search identical group
Phylum/Classfish metagenome; microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling
Species
Start position on genome 97
End posion on genome 22
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ggattttcgt
tRNA gene sequence 
GTCCCCATCGTCTAGAGGCCTAGGACACTGCCCTTTCACGGCTGTAACAGGGGTTCGAAT
CCCCTTGGGGACGCCA
Downstream region at tRNA end position 
ttccgataat
Secondary structure (Cloverleaf model)
>ENV08001439	Glu	TTC
                   t      GCCA ttccgataat
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    T   T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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