The detailed information of tRNA gene sequence


Sequence ID>WENV183776874
Genome IDPPYF01099915
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 11539
End posion on genome 11466
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnacat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCATTCGTTCGAGT
CGGATCTCCGCAACtg
Downstream region at tRNA end position 
caatgaggat
Secondary structure (Cloverleaf model)
>WENV183776874	fMet	CAT
                   t      ACtg caatgaggat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A G G C     A
      T G A        G      | | + | |     G
    T       C G A G       A T T C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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