The detailed information of tRNA gene sequence


Sequence ID>ENV08001464
Genome IDABNC01003076
Search identical group
Phylum/Classfish metagenome; viral community isolated from the gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA, fish were sick at time of sampling)
Species
Start position on genome 22
End posion on genome 98
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttttttaat
tRNA gene sequence 
TGGGAAATAGCTTAATTTGGTAGAGCACTTAGTTTGGGTCTAAGGGGTTGCAGGTTCAAG
TCCTGTTTTTCCAACCA
Downstream region at tRNA end position 
aattatgaga
Secondary structure (Cloverleaf model)
>ENV08001464	Pro	TGG
                   t      ACCA aattatgaga
                     T - A
                     G - C
                     G - C
                     G + T
                     A - T
                     A - T
                     A - T          T G
                    T     T G T C C     A
      T A A        A      + | | | |     A
    T       T T C G       G C A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        A     GGGTT
                    C - G
                    T - A
                    T - A
                    A - T
                    G - C
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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