The detailed information of tRNA gene sequence


Sequence ID>WENV183777755
Genome IDPPYF01110849
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 170
End posion on genome 76
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
attcaaaaat
tRNA gene sequence 
GGAAGATCATCGTCCCCGGTGGGGCGGCTGGACTTCAAATCCAGATGGGGCCGCCAGCGG
TCCTTGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
cttcttattt
Secondary structure (Cloverleaf model)
>WENV183777755	SeC	TCA
                   t      GCCA cttcttattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    A     T G T C C     A
      C C C        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     ATGGGGCCGCCAGCGGTCCTTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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