The detailed information of tRNA gene sequence


Sequence ID>ENV08001471
Genome IDABNC01041471
Search identical group
Phylum/Classfish metagenome; viral community isolated from the gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA, fish were sick at time of sampling)
Species
Start position on genome 18
End posion on genome 92
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtgtgagac
tRNA gene sequence 
ACTCTCGTAGCTCACCGGTAGAGCAGCTCCCTGATACGGAGAAGGTAGATGGTTCAATTC
CACCCGAGAGTACCA
Downstream region at tRNA end position 
aaacttaaat
Secondary structure (Cloverleaf model)
>ENV08001471	Ile	GAT
                   c      ACCA aaacttaaat
                     A - T
                     C - G
                     T - A
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C C A C C     A
        C A        A      |   | | |     A
      C     C T C G       G A T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTA
                    G   A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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