The detailed information of tRNA gene sequence


Sequence ID>ENV08001488
Genome IDABNE01002445
Search identical group
Phylum/Classfish metagenome; viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling
Species
Start position on genome 112
End posion on genome 36
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
nnnnttgcgt
tRNA gene sequence 
AGGGGAATCGCCAAGCTGGTTAAGGCACCGGATTTTGATTCCGGCATTCCAAGGTTCGAA
TCCTTGTTCCCCTGCCA
Downstream region at tRNA end position 
tttaattcgg
Secondary structure (Cloverleaf model)
>ENV08001488	Gln	TTG
                   t      GCCA tttaattcgg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     G T T C C     A
      C G A        C      | | | | |     G
    T       A C C G       C A A G G     C
    G         | | |                 T T
    G       A G G C
      T T A        A     CATTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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