The detailed information of tRNA gene sequence


Sequence ID>ENV08001492
Genome IDABNE01010285
Search identical group
Phylum/Classfish metagenome; viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling
Species
Start position on genome 19
End posion on genome 95
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
caacacaaat
tRNA gene sequence 
CGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAA
TCCTCTCTCGCCGACCA
Downstream region at tRNA end position 
ctttcaagaa
Secondary structure (Cloverleaf model)
>ENV08001492	Pro	TGG
                   t      ACCA ctttcaagaa
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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