The detailed information of tRNA gene sequence


Sequence ID>ENV08001494
Genome IDABNE01014728
Search identical group
Phylum/Classfish metagenome; viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling
Species
Start position on genome 10
End posion on genome 83
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ntgtttcctc
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCTGAAGCCTTCCAAGCTTAAGACGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
agttttggtc
Secondary structure (Cloverleaf model)
>ENV08001494	Gly	TCC
                   c      TCCA agttttggtc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        T     AGAC
                    G   A
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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