The detailed information of tRNA gene sequence


Sequence ID>ENV08001495
Genome IDABNE01016121
Search identical group
Phylum/Classfish metagenome; viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling
Species
Start position on genome 32
End posion on genome 105
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tcacgccgaa
tRNA gene sequence 
CTGCCCTTAGCTCAACTGGATAGAGCAATGGCCTTCTAAGCCATAGGTCGGGGGTTCGAG
TCCCTCAGGGCAGGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001495	Arg	TCT
                   a      Gnnn nnnnnnnnnn
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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