The detailed information of tRNA gene sequence


Sequence ID>ENV08001497
Genome IDABNE01018111
Search identical group
Phylum/Classfish metagenome; viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA; fish were sick at time of sampling
Species
Start position on genome 101
End posion on genome 16
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnnncac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTAATGGCAGCAGACTGTAAATCTGCCCTCTTACGAGTACGC
TGGTTCGAATCCAGCCCTCTCCACCA
Downstream region at tRNA end position 
ataggccggg
Secondary structure (Cloverleaf model)
>ENV08001497	Tyr	GTA
                   c      ACCA ataggccggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G       + | | |                 T T
    T       T G G C
      T A A        A     CCTCTTACGAGTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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