The detailed information of tRNA gene sequence


Sequence ID>ENV08001502
Genome IDABNF01001068
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA)
Species
Start position on genome 107
End posion on genome 33
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taattttgaA
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGATTGCAAATCCTTTTATTCCCCAGTTCGAAT
CCGGGTGCCGCCTAtt
Downstream region at tRNA end position 
taaaaagaag
Secondary structure (Cloverleaf model)
>ENV08001502	Cys	GCA
                   A      TAtt taaaaagaag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | |   |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TTATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK