The detailed information of tRNA gene sequence


Sequence ID>ENV08001503
Genome IDABNF01001859
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA)
Species
Start position on genome 40
End posion on genome 113
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgggttttG
tRNA gene sequence 
GGTGTTATAGCTCAGAGGCAGAGCTTTCGGCTGCAGTCCGAAGGGTCCGTGGTTCAATTC
CACGTGACACCTGaa
Downstream region at tRNA end position 
tttttntttt
Secondary structure (Cloverleaf model)
>ENV08001503	Cys	GCA
                   G      TGaa tttttntttt
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     T + G
                     A - T          T T
                    T     G C A C C     A
        G A        A      | | | | |     A
      A     C T C G       C G T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        T     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       T
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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