The detailed information of tRNA gene sequence


Sequence ID>ENV08001508
Genome IDABNF01012766
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA)
Species
Start position on genome 31
End posion on genome 107
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tggctggagt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCCGGTAGCGCACTGCGTTCGGGACGCAGGGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
aaccaagnnn
Secondary structure (Cloverleaf model)
>ENV08001508	Pro	CGG
                   t      ACCA aaccaagnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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