The detailed information of tRNA gene sequence


Sequence ID>ENV08001510
Genome IDABNF01013481
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA)
Species
Start position on genome 18
End posion on genome 94
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccaccattt
tRNA gene sequence 
GCCTAGATAGCTCAGTTGGCTAGAGCACCCGGTTCATACCCGGGCGGTCGAAGGTTCGAA
TCCTTTTCTAGGCACCA
Downstream region at tRNA end position 
tttgaaactt
Secondary structure (Cloverleaf model)
>ENV08001510	Met	CAT
                   t      ACCA tttgaaactt
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T
                     G - C
                     A - T          T A
                    T     T T T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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