The detailed information of tRNA gene sequence


Sequence ID>ENV08001514
Genome IDABNF01022184
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA)
Species
Start position on genome 93
End posion on genome 17
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaatctataa
tRNA gene sequence 
GGAAGCATAGCTCAGTTGGGAGAGCACCTGCCTTACAAGCAGGGGGGTCACTGGTTCAAG
TCCAGTTGTTTCCACCA
Downstream region at tRNA end position 
tatggggtgt
Secondary structure (Cloverleaf model)
>ENV08001514	Val	TAC
                   a      ACCA tatggggtgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     A - T          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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