The detailed information of tRNA gene sequence


Sequence ID>ENV08001517
Genome IDABNF01028330
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from tilapia pond at Kent SeaTech (Salton See, CA)
Species
Start position on genome 88
End posion on genome 14
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aacagtatat
tRNA gene sequence 
GCCCGCGTAGCTCAGTGGAAGAGCAGTAGCCTTCTAAGCTAAAGGTCGATGGTTCGATCC
CATCCGCGGGTACCA
Downstream region at tRNA end position 
atttaaaatt
Secondary structure (Cloverleaf model)
>ENV08001517	Arg	TCT
                   t      ACCA atttaaaatt
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     C T A C C     A
        G A        A      | | | | |     G
      T     C T C G       G A T G G     C
      G     | | | |                 T T
      G     G A G C
        A A        A     AGGTC
                    G   A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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