The detailed information of tRNA gene sequence


Sequence ID>ENV08001527
Genome IDABNG01019465
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 102
End posion on genome 27
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
nnnnnnnaac
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGCGTCGTTCGCAATGACGAGGTCAGGGGTTCGATC
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
gtgtactgat
Secondary structure (Cloverleaf model)
>ENV08001527	Ala	CGC
                   c      ACCA gtgtactgat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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