The detailed information of tRNA gene sequence


Sequence ID>ENV08001528
Genome IDABNG01032890
Search identical group
Phylum/Classfreshwater metagenome; microbial fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 13
End posion on genome 88
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tgccgaattt
tRNA gene sequence 
GGGGTTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCCGCGGTTCGATC
CCGCGTAGCTCCACCA
Downstream region at tRNA end position 
aattnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001528	Ala	GGC
                   t      ACCA aattnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     T - A
                     A - T          C T
                    T     G C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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