The detailed information of tRNA gene sequence


Sequence ID>ENV08001530
Genome IDABNH01010232
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 8
End posion on genome 87
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnattacga
tRNA gene sequence 
CTACCGTTTAGCTACAGTGGTAGAGCTAGCCGCCTTGTAAGCGGCAGGTTCGGGGGTTCA
AGTCCCTCACGGACGCACC
Downstream region at tRNA end position 
Actaattgtg
Secondary structure (Cloverleaf model)
>ENV08001530	Thr	TGT
                   a      CACC Actaattgtg
                     C - G
                     T   C
                     A   A
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C T C C C     A
    G A C A        T      | + | | |     A
  T         T C G A       G G G G G     C
  G         | | | |                 T T
  G         A G C T
    T A G          A     AGGTTC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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