The detailed information of tRNA gene sequence


Sequence ID>ENV08001531
Genome IDABNH01011024
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 90
End posion on genome 15
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
caattttcaa
tRNA gene sequence 
GCATCGGTAGCTCAGTTGGTAGAGCGCCCGGCTTCCAACCGGACGGTCGTGGGTTCAAGT
CCCACTCGATGCTCCA
Downstream region at tRNA end position 
ctctccccaa
Secondary structure (Cloverleaf model)
>ENV08001531	Gly	TCC
                   a      TCCA ctctccccaa
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     G - C
                     G + T          T G
                    T     C A C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     CGGTC
                    C   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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