The detailed information of tRNA gene sequence


Sequence ID>ENV08001533
Genome IDABNH01013802
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ngcgtaccat
tRNA gene sequence 
GTCCCGTTAGCTCAGTTGGATAGAGCAACAACCTTCTAAGTTGTGGGTCAGACGTTCGAA
TCGTCTACGGGATACCA
Downstream region at tRNA end position 
tcaattaact
Secondary structure (Cloverleaf model)
>ENV08001533	Arg	TCT
                   t      ACCA tcaattaact
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C T G C     A
      T G A        A      | | | | |     G
    T       C T C G       A G A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    A - T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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