The detailed information of tRNA gene sequence


Sequence ID>ENV08001536
Genome IDABNH01018962
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 15
End posion on genome 91
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
caaaataaat
tRNA gene sequence 
TCTTCTGTAGCTCAGTAGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTAGGTTCGAG
TCCTAGCGGGAGAGCAA
Downstream region at tRNA end position 
atttggtcgt
Secondary structure (Cloverleaf model)
>ENV08001536	Asn	GTT
                   t      GCAA atttggtcgt
                     T - A
                     C - G
                     T - A
                     T + G
                     C - G
                     T + G
                     G - C          T G
                    T     G A T C C     A
      T G A        A      | | | | |     G
    A       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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