The detailed information of tRNA gene sequence


Sequence ID>ENV08001537
Genome IDABNH01021731
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 87
End posion on genome 11
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aaaagcaatt
tRNA gene sequence 
GGTTCGGTAGCTCAGTTGGATAGAGCAACAGACTTCTAATCTGTAGGTCGTAGGTTCGAC
TCCTACCCGAATCACAA
Downstream region at tRNA end position 
tggagaatga
Secondary structure (Cloverleaf model)
>ENV08001537	Arg	TCT
                   t      ACAA tggagaatga
                     G - C
                     G + T
                     T - A
                     T - A
                     C - G
                     G - C
                     G - C          T C
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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