The detailed information of tRNA gene sequence


Sequence ID>ENV08001541
Genome IDABNH01030015
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 97
End posion on genome 14
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
nnnnntaaac
tRNA gene sequence 
GAGACTGTGGCGTAATCGGTAGCCGCAGCAGACTTAAAATCTGCCGCCATGTGCGTGAGG
GTTCGAGTCCCTCCAGTCTCACCA
Downstream region at tRNA end position 
aagaactcga
Secondary structure (Cloverleaf model)
>ENV08001541	Leu	TAA
                   c      ACCA aagaactcga
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    C       T G C G       G A G G G     C
    G         | | |                 T T
    G       C C G C
      T A G        A     CGCCATGTGCGT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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