The detailed information of tRNA gene sequence


Sequence ID>ENV08001542
Genome IDABNH01031250
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 25
End posion on genome 99
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tcattggacc
tRNA gene sequence 
GGGCACGTAGCTCAGCGGGAGAGCACCGCCTTGACATGGCGGGGGTCACAGGTTCAATCC
CTGTCGTGCCCACCA
Downstream region at tRNA end position 
tttnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001542	Val	GAC
                   c      ACCA tttnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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