Sequence ID | >ENV08001544 |
Genome ID | ABNI01008166 |
Phylum/Class | freshwater metagenome; viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA) |
Species | |
Start position on genome
|
2
|
End posion on genome
|
73
|
Amino Acid
|
Trp
|
Anticodon
|
CCA
|
Upstream region at tRNA start position
|
nnnnnnnnna
|
tRNA gene sequence
|
GCGTGTATGGTGTAGCGGTTAGCATTTTGGTCTCCAAAACCAAAGACATAAGTTCAAATC TTATTATGCGTGatt
|
Downstream region at tRNA end position
|
aaaaaaagaa
|
Secondary structure (Cloverleaf model) | >ENV08001544 Trp CCA
a Gatt aaaaaaagaa
G + T
C - G
G - C
T + G
G + T
T - A
A - T T A
T T A T T C A
C G A G | | | | | A
G T G T G A T A A G C
G + | | + T T
T G C A T
T A T AGAC
T - A
T - A
G - C
G - C
T - A
C A
T A
C C A
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |