The detailed information of tRNA gene sequence


Sequence ID>ENV08001545
Genome IDABNI01010878
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 48
End posion on genome 118
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tatataataa
tRNA gene sequence 
GCCTTTGTAGTTAAATGGTATAACGTTCGCTTGATAAGCGATTATTACAAGTTCAATTCT
TGTCGAAGGCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001545	Ile	GAT
                   a      Annn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     T + G
                     G - C          T T
                    T     T G T T C     A
        A A        A      | | | | |     A
      T     A T T G       A C A A G     C
      G     | | | |                 T T
      G     T A A C
        T A        G     TATT
                    T   T
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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