The detailed information of tRNA gene sequence


Sequence ID>ENV08001547
Genome IDABNI01012097
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 20
End posion on genome 95
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgttttattT
tRNA gene sequence 
CGGGTATTGGCTCATTTCGGTAGAGCGCTACATTTGGGATGTAGAAGTCGCAAGTTCAAA
TCCTGCATATCCGATtg
Downstream region at tRNA end position 
gggttaagga
Secondary structure (Cloverleaf model)
>ENV08001547	Pro	TGG
                   T      ATtg gggttaagga
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T
                     T - A          T A
                    T     C G T C C     A
      T T A        G      | | |   |     A
    T       C T C G       G C A A G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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