The detailed information of tRNA gene sequence


Sequence ID>ENV08001548
Genome IDABNI01013645
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 39
End posion on genome 112
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
accaagtttt
tRNA gene sequence 
GCTCTTATAGTAAAGTGGTATTACGCGGCTTTGGTATAGCCGAATCCTAAGTTCAATTCT
TAGTGAGAGCACCA
Downstream region at tRNA end position 
gttgnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001548	Thr	GGT
                   t      ACCA gttgnnnnnn
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     T + G
                     A - T          T T
                    T     G A T T C     A
        G A        A      | | | | |     A
      T     A A T G       C T A A G     C
      G     | | | |                 T T
      G     T T A C
        T A        G     AATC
                    C - G
                    G - C
                    G - C
                    C - G
                    T - A
                  T       T
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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