The detailed information of tRNA gene sequence


Sequence ID>ENV08001549
Genome IDABNI01013802
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 40
End posion on genome 113
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcaattacga
tRNA gene sequence 
ACATTCTTAGTTTAATGGTAGAACTACGGTCTCCAAAACCGTGAGTATTGGTTCGACTCC
AGTAGAATGTGCAA
Downstream region at tRNA end position 
acgnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001549	Trp	CCA
                   a      GCAA acgnnnnnnn
                     A - T
                     C - G
                     A - T
                     T - A
                     T - A
                     C - G
                     T - A          T C
                    T     T G A C C     A
        A A        A      | + | | |     G
      T     T T T G       A T T G G     C
      G     + | | |                 T T
      G     G A A C
        T A        T     GAGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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