The detailed information of tRNA gene sequence


Sequence ID>ENV08001550
Genome IDABNI01015374
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 85
End posion on genome 11
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aacaagtagc
tRNA gene sequence 
GCCGGATTAGCTCAGCGGTAGAGCAGCGGTTTTGTAAACCGAAGGTCGCGGGTTCAATCC
CTGCATCCGGCACCA
Downstream region at tRNA end position 
tttcaaaaag
Secondary structure (Cloverleaf model)
>ENV08001550	Thr	TGT
                   c      ACCA tttcaaaaag
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     C G T C C     A
        G A        A      | | + | |     A
      C     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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