The detailed information of tRNA gene sequence


Sequence ID>ENV08001551
Genome IDABNI01016252
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 93
End posion on genome 19
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggcacctgt
tRNA gene sequence 
CGCGGGGTAGCTCAGAGGTAGAGCGCGGGACTCATAATCCCGAGGCCGCGGGTTCGACAC
CCGCCCCCGCAACCA
Downstream region at tRNA end position 
ccgccctttg
Secondary structure (Cloverleaf model)
>ENV08001551	Met	CAT
                   t      ACCA ccgccctttg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          A C
                    T     C G C C C     A
        G A        A      | | | | |     G
      A     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGCC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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