The detailed information of tRNA gene sequence


Sequence ID>ENV08001554
Genome IDABNI01020092
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 25
End posion on genome 101
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
aagctcaaat
tRNA gene sequence 
AGGTAGATAATTCAGTTGGTTAGAATGCTCGGCTTATACCCAAGTTGTCGGGGGTTCAAA
TCCCTCTCTACCTACTA
Downstream region at tRNA end position 
tatgccacga
Secondary structure (Cloverleaf model)
>ENV08001554	Ile	TAT
                   t      ACTA tatgccacga
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T T A       G G G G G     C
    G       | | | |                 T T
    G       G A A T
      T T A        G     TTGTC
                    C - G
                    T - A
                    C   A
                    G - C
                    G - C
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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