The detailed information of tRNA gene sequence


Sequence ID>ENV08001560
Genome IDABNI01039138
Search identical group
Phylum/Classfreshwater metagenome; viral fraction from prebead pond at Kent SeaTech (Salton Sea, CA)
Species
Start position on genome 94
End posion on genome 19
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
nntgtcgacg
tRNA gene sequence 
GCGGGAATAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGAGGTCGCGAGTTCGAGC
CTCGTTTCCCGCTCCA
Downstream region at tRNA end position 
ttaaaattta
Secondary structure (Cloverleaf model)
>ENV08001560	Gly	GCC
                   g      TCCA ttaaaattta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          C G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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