The detailed information of tRNA gene sequence


Sequence ID>WENV183787378
Genome IDPPYF01322936
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 25
End posion on genome 122
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ataagcacat
tRNA gene sequence 
GGGGGTAGTTGGGTAACTGGTGTGCCTCCTAGTCTTCAAAACTAGTGTAGGGCGTTAAGA
GCGTCCTGGGTGGGTTCGATTCCCACATGCCTCCGCCA
Downstream region at tRNA end position 
aaaaacagac
Secondary structure (Cloverleaf model)
>WENV183787378	SeC	TCA
                   t      GCCA aaaaacagac
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    T     C A C C C     A
      C A A        T      | | | | |     G
    T       T G G G       G T G G G     C
    G       + | | +                 T T
    G       G C C T
      T G T        C     TGTAGGGCGTTAAGAGCGTCCTGG
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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